Tutorial on Grid Computing - EMBnet Conference 2008

chaired by Giorgio Maggi
Wednesday, September 17, 2008 from to (Europe/Rome)
at Park Hotel San Michele
Martina Franca (Puglia), Italy
Go to day
  • Wednesday, September 17, 2008
    • 09:30 - 13:00 Morning session
      Material: slides powerpoint file
      • 09:30 The Grid in practice 30'
        Speaker: Prof. Josè R. Valverde (Centro Nacional de Biotecnología (CSIC) – Madrid - Spain)
        Material: Slides powerpoint file
      • 10:00 Authenticated Grid access with robot certificates 30'
        Speaker: Dr. Giuseppe La Rocca (INFN Catania)
        Material: Slides powerpoint file
      • 10:30 The Grid Problem Solving Environment for Bioinformatics: the LIBI experience 30'
        Speakers: Dr. Maria Mirto (Università del Salento - Lecce), Prof. Italo Epicoco (Università del Salento - Lecce)
        Material: Slides powerpoint file
      • 11:00 Coffee break 30'
      • 11:30 Managing Biological Databases in Grid: the GRelC Experience 30'
        Speakers: Dr. Salvatore Vadacca (Euro-Mediterranean Centre for Climate Change), Mr. Alessandro Negro (Euro-Mediterranean Centre for Climate Change)
        Material: Slides pdf file
      • 12:00 Federated database 30'
        A brief talk in which the concept of data federation will be provided and an overview of the schema of federated pieces of bioinformatic information within the LIBI platform will be shown
        
        Speaker: Dr. Gaetano Scioscia (IBM Italy S.p.A - Innovation Center – Bari)
        Material: Slides powerpoint file
      • 12:30 Federated database: data retrieval tool 30'
        An hands-on session during which a web-based application, named Data Discovery and Query Builder (DDQB), will be available to let attending people retrieve valuable information from the federated database by the use of abstract bioinformatic entities arranged in taxonomies.
        
        Speaker: Graziano Pappadà (Exhicon s.r.l. - Bari)
    • 13:00 - 14:30 Lunch
    • 14:30 - 17:30 Afternoon session
      • 14:30 The GENIUS Grid Portal, an INFN portal to access the EGEE grid infrastructure (application examples) 30'
        Speaker: Dr. Giuseppe La Rocca (INFN Catania)
        Material: Slides powerpoint file more information word file unknown type file text word file
      • 15:00 The AntiHunter application 30'
        Speaker: Dr. Francesco Falciano (CINECA - Bologna)
        Material: Slides powerpoint file
      • 15:30 The Job Submission tool (JST) 20'
        Speaker: Dr. Giacinto Donvito (INFN - Bari)
        Material: Slides powerpoint file
      • 15:50 The CSTminer application 30'
        Speaker: Dr. Giacinto Donvito (INFN-BARI)
        Material: Slides powerpoint file
      • 16:20 The Gene Analogue Finder application 30'
        Speaker: Dr. Giulia De Sario (ITB-Bari)
        Material: Slides powerpoint file data link
      • 16:50 Microarray Clusters validation with resampling techniques 30'
        Speaker: Dr. Angelica Tulipano (ITB-Bari)
        Material: Slides powerpoint file data link